Breakfast Egg Muffins

Featured in: Oven-Ready Treats

Start your morning with these protein-packed egg muffins featuring crispy bacon, sharp cheddar cheese, and colorful diced bell peppers. Each handheld bite delivers a perfect balance of flavors and textures—fluffy eggs, gooey melted cheese, savory bacon, and sweet vegetables.

Ready in just 35 minutes, these make-ahead muffins are ideal for meal prep. Bake a batch on Sunday, store them in the refrigerator, and enjoy warm, protein-rich breakfasts throughout your busy week. They reheat beautifully in the microwave.

Customize them easily by swapping bacon for sausage, ham, or adding spinach for a vegetarian twist. Try different cheeses like feta or mozzarella to keep things interesting.

Updated on Mon, 02 Feb 2026 11:08:00 GMT
Golden-brown Breakfast Egg Muffins featuring melted cheddar, crisp bacon, and colorful bell peppers, served warm for a savory morning meal. Save to Pinterest
Golden-brown Breakfast Egg Muffins featuring melted cheddar, crisp bacon, and colorful bell peppers, served warm for a savory morning meal. | sweetfawakih.com

My kitchen counter was cluttered with lunch boxes and backpacks one frantic Tuesday when I realized I had nothing quick to grab for breakfast. I cracked a few eggs into a bowl, tossed in whatever was left in the fridge, and poured the whole thing into a muffin tin. Twenty minutes later, I had a dozen golden cups that saved the morning. Those egg muffins became our weekday ritual, and now I make a batch every Sunday so breakfast is never a scramble again.

I started making these the week my neighbor mentioned she never had time to sit down for breakfast. I handed her a container of warm egg muffins on my way out the door, and she texted me an hour later asking for the recipe. Now we swap flavors every few weeks, and her kids request the bacon and cheddar version every time. It is funny how something so simple can turn into a little tradition between friends.

Ingredients

  • 6 large eggs: The foundation of these muffins, giving them structure and a fluffy texture when whisked with a little milk.
  • 1/2 cup milk: Keeps the eggs tender and light, not rubbery, and helps them puff up slightly in the oven.
  • 1/2 cup shredded cheddar cheese: Melts into pockets of sharp, creamy goodness and holds everything together as it bakes.
  • 1/2 cup diced bell peppers: Adds sweetness and a pop of color, and I like to use a mix of red and yellow for contrast.
  • 1/2 cup diced onions: Brings a subtle savory note that balances the richness of the cheese and bacon.
  • 1/2 cup cooked and crumbled bacon: Crispy, salty, and smoky, it makes every bite feel indulgent without any extra work.
  • 1/2 teaspoon salt: Just enough to bring out the flavors without overpowering the natural taste of the eggs.
  • 1/4 teaspoon black pepper: A gentle warmth that ties all the ingredients together.
  • 1/4 teaspoon garlic powder: Adds a hint of depth that makes these taste more intentional than a quick scramble.
  • 1/4 teaspoon paprika: A touch of color and a faint sweetness that rounds out the seasoning.
  • Cooking spray or olive oil: Essential for easy release, because nothing is worse than muffins that stick to the tin.

Instructions

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Preheat and Prep:
Set your oven to 350°F and generously grease a 12 cup muffin tin with cooking spray or a light brush of olive oil. Do not skip the greasing, or you will spend ten minutes prying out stubborn muffins later.
Whisk the Base:
In a large bowl, whisk together the eggs and milk until the mixture is smooth and slightly frothy. This aeration helps the muffins rise and stay tender.
Fold in the Fillings:
Stir in the cheddar cheese, bell peppers, onions, bacon, salt, black pepper, garlic powder, and paprika until everything is evenly distributed. The batter should look colorful and chunky, almost like a savory confetti.
Fill the Cups:
Pour the mixture into each muffin cup, filling them about two thirds full to leave room for a little puff as they bake. Try to get an even mix of fillings in each cup so every muffin tastes complete.
Bake Until Golden:
Slide the tin into the oven and bake for 18 to 20 minutes, until the muffins are set and lightly golden on top. A toothpick poked in the center should come out clean, with no wet egg clinging to it.
Cool and Release:
Let the muffins rest in the tin for 5 minutes, then run a butter knife around the edges to loosen them gently. Pop them out and serve warm, or let them cool completely before storing.
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Blend soups, smoothies, sauces, and baby food directly in pots for quick, smooth results.
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Savory Breakfast Egg Muffins baking in a muffin tin, with fluffy texture and loaded with cheese, onions, and crumbled bacon. Save to Pinterest
Savory Breakfast Egg Muffins baking in a muffin tin, with fluffy texture and loaded with cheese, onions, and crumbled bacon. | sweetfawakih.com

One Sunday morning, I made a double batch and left half on the counter to cool while we ate the other half warm. My son grabbed one on his way out to soccer practice, and by the time he got home, he had already texted me asking if there were more in the fridge. That is when I knew these were not just convenient, they were actually good enough to crave.

How to Store and Reheat

Once the muffins are completely cool, stack them in an airtight container with a piece of parchment between layers if you are worried about sticking. They keep in the fridge for up to five days and taste just as good reheated in the microwave for 30 seconds. I have also frozen them in a freezer bag for up to three months, and they thaw overnight in the fridge without losing any texture.

Ways to Change It Up

I have made these with crumbled sausage instead of bacon, and they tasted like breakfast at a diner. You can also leave out the meat entirely and add a handful of baby spinach or sliced mushrooms for a vegetarian version that still feels hearty. One time I stirred in a few tablespoons of salsa before baking, and the slight tang made them feel almost Southwestern.

Serving Suggestions

These muffins are perfect on their own, but I like to serve them with a small bowl of salsa or a drizzle of hot sauce for anyone who wants a kick. If I am feeding a crowd, I set out a platter with sliced avocado, cherry tomatoes, and a few extra napkins, and people build their own little breakfast plates. They also pack well in lunch boxes with a piece of fruit and some yogurt.

  • Serve with fresh fruit or a simple green salad for a balanced breakfast.
  • Pack them in a container with a side of salsa for an easy grab and go meal.
  • Reheat and tuck into a whole grain English muffin for a portable breakfast sandwich.
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Close-up of a sliced Breakfast Egg Muffin revealing fluffy eggs, melted cheddar, and crispy bacon pieces, perfect for a gluten-free breakfast. Save to Pinterest
Close-up of a sliced Breakfast Egg Muffin revealing fluffy eggs, melted cheddar, and crispy bacon pieces, perfect for a gluten-free breakfast. | sweetfawakih.com

These egg muffins have become one of those recipes I do not even think about anymore, I just make them. I hope they bring the same kind of easy, warm comfort to your mornings that they have brought to mine.

Recipe FAQs

How do I store these egg muffins?

Store cooled muffins in an airtight container in the refrigerator for up to 5 days. For longer storage, freeze them for up to 2 months. Thaw frozen muffins overnight in the refrigerator before reheating.

Can I make these egg muffins ahead of time?

Absolutely! These muffins are perfect for meal prep. Bake them on the weekend, refrigerate, and reheat individual portions in the microwave for 30-45 seconds when ready to eat.

What other ingredients can I add?

Try spinach, mushrooms, diced tomatoes, or jalapeños. Swap bacon for cooked sausage, ham, or chorizo. Feta, mozzarella, or pepper jack work great instead of cheddar.

Are these egg muffins gluten-free?

Yes, these muffins are naturally gluten-free as written. Always double-check labels on processed ingredients like sausage or seasoning blends if you need strict gluten-free assurance.

How do I know when the muffins are done?

The muffins are ready when they're set and lightly golden on top, about 18-20 minutes. A toothpick inserted in the center should come out clean. They'll continue cooking slightly as they cool.

Can I freeze these egg muffins?

Yes, these freeze exceptionally well. Cool completely, wrap individually or place in freezer bags, and freeze for up to 2 months. Thaw in the refrigerator overnight and reheat in the microwave.

Breakfast Egg Muffins

Golden egg muffins packed with cheddar, bacon, and bell peppers for easy mornings

Prep Time
10 minutes
Time to Cook
20 minutes
Preparation & Cooking
30 minutes
Created by Trevor Holt


Skill Level Easy

Cuisine American

Portions 6 Makes

Diet Preferences No Gluten, Reduced-Carb

What You Need

Eggs & Dairy

01 6 large eggs
02 1/2 cup whole milk
03 1/2 cup shredded cheddar cheese

Vegetables

01 1/2 cup diced bell peppers (red, green, or yellow)
02 1/2 cup diced onions

Proteins

01 1/2 cup cooked and crumbled bacon

Seasonings

01 1/2 teaspoon salt
02 1/4 teaspoon black pepper
03 1/4 teaspoon garlic powder
04 1/4 teaspoon paprika

For Greasing

01 Cooking spray or olive oil for muffin tin

Directions

Step 01

Preheat oven: Set oven to 350°F (175°C) and allow it to fully preheat.

Step 02

Prepare muffin tin: Grease a standard 12-cup muffin tin with cooking spray or olive oil.

Step 03

Combine eggs and dairy: In a large bowl, whisk together eggs and milk until well combined and slightly frothy.

Step 04

Mix filling ingredients: Stir in cheddar cheese, bell peppers, onions, bacon, salt, black pepper, garlic powder, and paprika until evenly mixed.

Step 05

Fill muffin tin: Pour the mixture into the prepared muffin tin, filling each cup about 2/3 full.

Step 06

Bake muffins: Bake for 18-20 minutes, or until muffins are set and lightly golden. A toothpick inserted in the center should come out clean.

Step 07

Cool and remove: Remove from oven and let cool for 5 minutes. Carefully loosen muffins with a knife if needed and remove from tin.

Step 08

Serve or store: Serve warm, or cool completely and store in an airtight container in the refrigerator for up to 5 days. Reheat in the microwave before serving.

Tools You'll Need

  • 12-cup muffin tin
  • Large mixing bowl
  • Whisk
  • Measuring cups and spoons
  • Knife and cutting board

Allergy Details

Review every ingredient for allergens. Unsure? Ask a healthcare provider.
  • Contains eggs
  • Contains milk and dairy products
  • May contain pork depending on protein selection
  • Check all processed ingredients for gluten contamination

Nutritional Info (for each serving)

Details here serve as general guidance and aren't a substitute for health advice.
  • Energy: 150
  • Fats: 10 g
  • Carbohydrates: 2 g
  • Proteins: 11 g